Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CTNND2Catenin delta-2. (1103 aa)    
Predicted Functional Partners:
TCF7L2
Transcription factor 7-like 2.
     
 0.901
LEF1_0
Lymphoid enhancer-binding factor 1.
     
  0.900
LEF1
Lymphoid enhancer-binding factor 1.
     
  0.900
CTNNB1
Catenin beta-1.
   
 0.829
LOC110469820
Catenin delta-2-like.
 
      0.799
JUP
Junction plakoglobin.
   
 0.771
CDH8
Cadherin-8; Cadherins are calcium-dependent cell adhesion proteins.
    
 0.711
CTNNA2
Catenin alpha 2.
   
 0.673
CTNNA2-2
Catenin alpha-2 isoform X1.
   
 0.673
CTNNA1
Catenin alpha-1.
   
 0.673
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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