STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FYTTD1UAP56-interacting factor. (315 aa)    
Predicted Functional Partners:
SARNP
SAP domain-containing ribonucleoprotein.
    
 0.810
DDX39B
Spliceosome RNA helicase Ddx39b.
   
 0.779
POLDIP3
Polymerase delta-interacting protein 3.
    
 0.768
CHTOP
Chromatin target of PRMT1 protein.
    
 0.733
THOC5
THO complex subunit 5.
    
 0.707
THOC7
THO complex subunit 7.
   
 0.705
THOC2
THO complex subunit 2.
    
 0.690
ALYREF
THO complex subunit 4.
    
 0.677
THOC1
THO complex subunit 1.
   
 0.661
CAP1
Adenylyl cyclase-associated protein; Belongs to the CAP family.
   
 0.636
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.