STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCORL1BCL-6 corepressor-like protein 1. (1564 aa)    
Predicted Functional Partners:
PCGF1
Polycomb group RING finger protein 1.
    
 0.922
SKP1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
 0.809
KDM2A
Lysine-specific demethylase 2A.
   
 0.660
KDM2B
Lysine-specific demethylase 2B.
   
 0.660
PCGF6
Polycomb group RING finger protein 6.
    
 0.593
PCGF3
Polycomb group RING finger protein 3.
    
 0.520
GSKIP
GSK3B-interacting protein isoform X1.
      
 0.480
YAF2
YY1-associated factor 2.
    
 
 0.431
RYBP
RING1 and YY1-binding protein.
    
 
 0.431
RNF2
E3 ubiquitin-protein ligase RING2.
    
 0.409
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.