Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BCORL1BCL-6 corepressor-like protein 1. (1564 aa)    
Predicted Functional Partners:
PCGF1
Polycomb group RING finger protein 1.
    
 0.964
BCOR
BCL-6 corepressor.
     
 
0.900
PCGF3
Polycomb group RING finger protein 3.
    
 0.862
CBX6
Chromobox 6.
    
   0.838
PCGF6
Polycomb group RING finger protein 6.
    
 0.786
YAF2
YY1-associated factor 2.
    
 
 0.778
RYBP
RING1 and YY1-binding protein.
    
 
 0.778
RNF2
E3 ubiquitin-protein ligase RING2.
    
 0.723
KDM2A
Lysine-specific demethylase 2A.
   
 0.721
KDM2B
Lysine-specific demethylase 2B.
   
 0.721
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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