Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
NUP35Nucleoporin NUP53. (362 aa)    
Predicted Functional Partners:
NUP93
Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family.
    
 0.998
NUP155
Nuclear pore complex protein Nup155.
   
 0.997
NDC1
Nucleoporin NDC1.
   
 0.995
NUP85
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.992
NUP188
Nucleoporin NUP188.
    
 0.991
NUP98
Nuclear pore complex protein Nup98-Nup96.
   
 0.990
NUP153
Nuclear pore complex protein Nup153.
    
 0.990
NUP88
Nuclear pore complex protein Nup88.
   
 0.990
NUP43
Nucleoporin Nup43.
   
 0.990
NUP210
Nuclear pore membrane glycoprotein 210.
    
 0.989
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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