STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF1E1Eukaryotic translation elongation factor 1 epsilon-1. (178 aa)    
Predicted Functional Partners:
EPRS1
Bifunctional glutamate/proline--tRNA ligase.
   
0.998
AIMP2
Aminoacyl tRNA synthase complex-interacting multifunctional protein 2.
   
 0.984
MARS1
Methionine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.974
AIMP1
Aminoacyl tRNA synthase complex-interacting multifunctional protein 1.
   
 0.952
DARS1
Aspartate--tRNA ligase, cytoplasmic.
   
 0.938
IARS1
Isoleucine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.920
QARS1
Glutamine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.912
RARS1
Arginine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.883
LARS1
Leucine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.882
KARS1
Lysine--tRNA ligase.
   
 0.881
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.