STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TXNDC5Thioredoxin domain-containing protein 5; Belongs to the protein disulfide isomerase family. (417 aa)    
Predicted Functional Partners:
ERO1A
ERO1-like protein alpha.
   
 0.950
ERO1B
ERO1-like protein beta.
   
 0.949
ENSLSDP00000003590
annotation not available
     
 0.923
PRDX4
Peroxiredoxin-4.
  
 0.921
HSPA5
Glucose-regulated protein; Belongs to the heat shock protein 70 family.
   
 0.893
BLOC1S6
Biogenesis of lysosome-related organelles complex 1 subunit 6; Component of the BLOC-1 complex, a complex that is required for normal biogenesis of lysosome-related organelles (LRO), such as platelet dense granules and melanosomes. In concert with the AP-3 complex, the BLOC-1 complex is required to target membrane protein cargos into vesicles assembled at cell bodies for delivery into neurites and nerve terminals. The BLOC-1 complex, in association with SNARE proteins, is also proposed to be involved in neurite extension. May play a role in intracellular vesicle trafficking, particular [...]
     
  0.809
JCHAIN
Immunoglobulin J chain.
   
  
 0.746
BLOC1S3
Biogenesis of lysosome-related organelles complex 1 subunit 3.
     
  0.725
CALR
Calreticulin.
   
 0.723
DNAJC3
DnaJ subfamily C member 3.
   
 0.707
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.