Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ENSLSDP00000002298Transient receptor potential cation channel subfamily M member 8-like. (110 aa)    
Predicted Functional Partners:
TRPM8
LOW QUALITY PROTEIN: transient receptor potential cation channel subfamily M member 8.
 
     0.921
TRPV1
Transient receptor potential cation channel subfamily V member 1; Belongs to the transient receptor (TC 1.A.4) family.
   
 
 0.679
TRPA1
Transient receptor potential cation channel subfamily A member 1.
     
 0.672
TRPV3
Transient receptor potential cation channel subfamily V member 3; Belongs to the transient receptor (TC 1.A.4) family.
   
 
 0.628
TRPV2
Transient receptor potential cation channel subfamily V member 2; Belongs to the transient receptor (TC 1.A.4) family.
   
 
 0.624
LOC110480824
Transient receptor potential cation channel subfamily V member 5; Belongs to the transient receptor (TC 1.A.4) family.
   
 
 0.495
DCLK1
Serine/threonine-protein kinase DCLK1.
   
  
 0.487
CALHM1
Calcium homeostasis modulator protein 1.
      
 0.482
POU2F3
POU domain protein.
      
 0.471
SLC18A3
Vesicular acetylcholine transporter.
      
 0.467
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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