STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATPSCKMTProtein FAM173B. (229 aa)    
Predicted Functional Partners:
TRMT112
Multifunctional methyltransferase subunit TRM112-like protein.
   
 0.597
EEF2KMT
Protein-lysine N-methyltransferase EEF2KMT.
      
 0.582
ENSLSDP00000008068
annotation not available
   
  0.580
EPRS1
Bifunctional glutamate/proline--tRNA ligase.
   
 
 0.559
METTL18
Histidine protein methyltransferase 1.
   
  
 0.551
METTL21A
Protein N-lysine methyltransferase METTL21A.
      
 0.550
EEF1AKMT1
EEF1A lysine methyltransferase 1; Protein-lysine methyltransferase that selectively catalyzes the trimethylation of EEF1A at 'Lys-79'; Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM5 family.
      
 0.549
TULP4
Tubby-related protein 4; Belongs to the TUB family.
      
 0.542
VCPKMT
Protein-lysine methyltransferase METTL21D.
      
 0.531
METTL23
Methyltransferase-like protein 23.
      
 0.529
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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