Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
RIOK1Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (567 aa)    
Predicted Functional Partners:
LTV1
Protein LTV1.
   
 0.993
NOB1
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
   
 0.991
PRMT5
Protein arginine N-methyltransferase 5.
   
 
 0.966
RPS2
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
 0.957
BYSL
Bystin.
   
 0.955
WDR77
Methylosome protein 50.
   
 
 0.939
RPS14
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 0.936
RPS6
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
  0.923
RPS9
40S ribosomal protein S9.
   
  0.921
PNO1
RNA-binding protein PNO1.
   
 0.919
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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