STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTPAPPoly(A) RNA polymerase, mitochondrial. (554 aa)    
Predicted Functional Partners:
PAPOLG
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
   
  
 0.572
SUPV3L1
ATP-dependent RNA helicase SUPV3L1, mitochondrial.
   
  
 0.551
PNPT1
Polyribonucleotide nucleotidyltransferase 1, mitochondrial.
   
  
 0.545
LRPPRC
Leucine-rich PPR motif-containing protein, mitochondrial.
      
 0.524
SLIRP
RRM domain-containing protein.
    
 0.508
BICC1
Protein bicaudal C 1.
   
 
 0.465
ELAC2
Zinc phosphodiesterase ELAC protein 2.
      
 0.465
GRSF1
G-rich sequence factor 1.
    
 0.461
TENT4B
Non-canonical poly(A) RNA polymerase PAPD5.
      
 0.459
POLRMT
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.
   
  
 0.438
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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