STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MKXHomeobox protein Mohawk. (350 aa)    
Predicted Functional Partners:
TNMD
Tenomodulin.
      
 0.575
ATRX
Transcriptional regulator ATRX.
    
 
 0.505
DSCC1
Sister chromatid cohesion protein DCC1.
      
 0.477
SRF
Serum response factor.
   
 
 0.471
ENSLSDP00000007379
annotation not available
    
 
 0.463
HHEX
Hematopoietically-expressed homeobox protein HHEX.
   
 
 0.458
PBX3
Pre-B-cell leukemia transcription factor 3.
    
0.448
PBX1
Pre-B-cell leukemia transcription factor 1.
    
 0.448
PBX4
Pre-B-cell leukemia transcription factor 4.
    
 0.448
HOXC9
Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.
    
 
 0.446
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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