STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDYLChromodomain Y-like protein. (544 aa)    
Predicted Functional Partners:
MIER1
Mesoderm induction early response protein 1.
   
 
 0.951
EHMT1
Histone-lysine N-methyltransferase EHMT1.
   
 0.942
SCP2
Non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.896
HSDL2
Hydroxysteroid dehydrogenase-like protein 2.
  
 0.873
UHRF2
E3 ubiquitin-protein ligase UHRF2.
      
 0.873
WIZ
Protein Wiz.
    
 0.866
LOC110482848
Cytochrome b reductase 1.
    
   0.857
SUV39H1
Histone-lysine N-methyltransferase SUV39H1.
   
 0.809
SUV39H2
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
   
 0.809
LOC110469849
[histone H3]-lysine36 N-dimethyltransferase SETMAR.
   
 0.809
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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