STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACBD5Acyl-CoA-binding domain-containing protein 5; Binds medium- and long-chain acyl-CoA esters. (503 aa)    
Predicted Functional Partners:
PEX14
Peroxisomal membrane protein PEX14.
   
 0.699
PEX3
Peroxisomal biogenesis factor 3.
    
 0.645
PEX16
Peroxisomal membrane protein PEX16.
   
 0.645
PEX19
Peroxisomal biogenesis factor 19.
     
 0.639
PEX13
Peroxisomal membrane protein PEX13.
   
 0.638
ABCD2
ATP-binding cassette sub-family D member 2.
     
 0.631
PEX12
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
     
 0.624
ATAD1
ATPase family AAA domain-containing protein 1; Belongs to the AAA ATPase family.
   
 
 0.619
ABCD3
ATP-binding cassette sub-family D member 3.
   
 
 0.612
GDAP1
Ganglioside-induced differentiation-associated protein 1; Belongs to the GST superfamily.
     
 0.597
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.