STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STRA8Stimulated by retinoic acid 8. (306 aa)    
Predicted Functional Partners:
CLDN11
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
      
 0.672
WT1
Wilms tumor B.
      
 0.672
SOX9
Transcription factor SOX-9.
      
 0.672
SPO11
Meiotic recombination protein SPO11.
      
 0.672
DAZL
Deleted in azoospermia-like.
   
  
 0.591
CYP26B1
Cytochrome P450 26B1; Belongs to the cytochrome P450 family.
      
 0.585
SYCP3
Synaptonemal complex protein 3.
      
 0.570
ZBTB16
Zinc finger and BTB domain-containing protein 16.
      
 0.515
NR3C2
Mineralocorticoid receptor.
      
 0.514
CYP17A1
Steroid 17-alpha-hydroxylase/17,20 lyase; Belongs to the cytochrome P450 family.
      
 0.468
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.