STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STRA8Stimulated by retinoic acid 8. (306 aa)    
Predicted Functional Partners:
CYP26B1
Cytochrome P450 26B1; Belongs to the cytochrome P450 family.
      
 0.795
DAZL
Deleted in azoospermia-like.
   
  
 0.736
SYCP3
Synaptonemal complex protein 3.
      
 0.711
TEKT1
Tektin-1.
   
  
 0.690
NRBP1
Nuclear receptor-binding protein.
      
 0.684
SPO11
Meiotic recombination protein SPO11.
      
 0.682
WT1
Wilms tumor B.
      
 0.681
LRRIQ1
Leucine-rich repeat and IQ domain-containing protein 1.
   
  
 0.672
NME8
Thioredoxin domain-containing protein 3; Belongs to the NDK family.
      
 0.646
ZBTB16
Zinc finger and BTB domain-containing protein 16.
      
 0.598
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.