Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCRN2Secernin-2. (389 aa)    
Predicted Functional Partners:
TAB2
TGF-beta-activated kinase 1 and MAP3K7-binding protein 2.
    
   0.788
TAB1
TGF-beta-activated kinase 1 and MAP3K7-binding protein 1.
    
   0.752
ALKBH1
Alkylated DNA repair protein alkB 1.
      
 0.572
ENKD1
Enkurin domain-containing protein 1.
      
 0.566
ADO
2-aminoethanethiol dioxygenase.
      
 0.545
NAA30
N-alpha-acetyltransferase 30.
      
 0.530
TAB3
TGF-beta-activated kinase 1 and MAP3K7-binding protein 3.
    
   0.509
MAP2
Microtubule-associated protein.
    
   0.465
MAPT
Microtubule associated protein tau.
    
   0.465
ZNF639
Zinc finger protein 639.
    
 
 0.456
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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