STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLHL1Kelch-like protein 1. (745 aa)    
Predicted Functional Partners:
CUL3
Cullin-3; Belongs to the cullin family.
    
 0.783
KLF5
Krueppel-like factor 5.
    
 0.680
DACH1
Dachshund 1.
    
 
 0.674
MZT1
Mitotic-spindle organizing protein 1.
      
 0.672
PIBF1
Progesterone-induced-blocking factor 1.
      
 0.672
DNAJC15
DnaJ subfamily C member 15.
      
 0.672
RBX1
E3 ubiquitin-protein ligase RBX1.
    
 0.655
BBS9
Protein PTHB1.
    
 0.643
BBS4
Bardet-Biedl syndrome 4 protein.
    
 0.626
TTC8
Tetratricopeptide repeat protein 8.
    
 0.587
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.