Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC110477484Carbonic anhydrase 13; Belongs to the alpha-carbonic anhydrase family. (261 aa)    
Predicted Functional Partners:
CABIN1
Calcineurin-binding protein cabin-1.
   
  
 0.565
CA7
Carbonic anhydrase 7; Belongs to the alpha-carbonic anhydrase family.
     
  0.532
STK40
Serine/threonine-protein kinase 40.
      
 0.523
RPF2
Ribosome production factor 2.
   
 
 0.522
RLOC_00004118
Uncharacterized protein.
   
  
 0.499
P2RY1
P2Y purinoceptor 1; Belongs to the G-protein coupled receptor 1 family.
   
    0.492
WDR18
WD repeat-containing protein 18.
   
  
 0.470
GRWD1
Glutamate-rich WD repeat-containing protein 1.
   
  
 0.456
SLC4A1
Anion exchange protein.
   
 
 0.451
SLC4A2
Anion exchange protein.
   
 
 0.451
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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