STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AVPR1BVasopressin V1b receptor. (422 aa)    
Predicted Functional Partners:
LOC110473284
Vasotocin-neurophysin VT.
   
 0.976
GNA11
Guanine nucleotide-binding protein subunit alpha-11.
    
 0.930
LOC110470681
Guanine nucleotide-binding protein G(Q) subunit alpha.
    
 0.930
GNA12
Guanine nucleotide-binding protein subunit alpha-12.
    
  0.913
GNA13
Guanine nucleotide-binding protein subunit alpha-13.
    
  0.913
AVPR1A
Vasopressin V1a receptor.
  
  
 
0.906
LOC110478544
[Arg8]-vasotocin receptor; Belongs to the G-protein coupled receptor 1 family. Vasopressin/oxytocin receptor subfamily.
  
  
 
0.903
LOC110473283
Vasotocin-neurophysin VT; Belongs to the vasopressin/oxytocin family.
   
 0.629
GNAS
Guanine nucleotide-binding protein G(S) subunit alpha.
    
 0.577
GNAL
Guanine nucleotide-binding protein G(Olf) subunit alpha.
    
 0.577
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.