Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC16A9Monocarboxylate transporter 9. (527 aa)    
Predicted Functional Partners:
LACTB2
Beta-lactamase-like protein 2.
      
 0.671
GRAP2
GRB2 related adaptor protein 2.
      
 0.622
RBBP6
E3 ubiquitin-protein ligase RBBP6.
      
 0.605
UBE2H
Ubiquitin-conjugating enzyme E2 H; Belongs to the ubiquitin-conjugating enzyme family.
   
 
 0.577
SLC25A48
Solute carrier family 25 member 48; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.570
EMB
Embigin.
    
 0.551
SLC22A4
Solute carrier family 22 member 4.
    
 
 0.530
LOC110481037
Solute carrier family 22 member 5.
    
 
 0.530
LOC110467728
Multidrug and toxin extrusion protein; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.
      
 0.528
LOC110467729
Multidrug and toxin extrusion protein; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.
      
 0.528
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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