STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR91WD repeat-containing protein 91. (748 aa)    
Predicted Functional Partners:
WDR81
WD repeat-containing protein 81.
   
 
 0.952
CCDC93
Coiled-coil domain-containing protein 93.
      
 0.537
ASCC3
Activating signal cointegrator 1 complex subunit 3.
      
 0.532
VPS18
Vacuolar protein sorting-associated protein 18.
      
 0.523
CCZ1
Vacuolar fusion protein CCZ1.
      
 0.518
PRRC2B
Protein PRRC2B.
      
 0.476
BECN1
Beclin-1.
    
 
 0.462
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.