STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MGPMatrix Gla protein. (104 aa)    
Predicted Functional Partners:
KCND2
Potassium voltage-gated channel Shal-related subfamily D member 2.
      
 0.672
SCUBE1
Signal peptide, CUB and EGF-like domain-containing protein 1.
      
 0.672
KCND3
Potassium voltage-gated channel subfamily D member 3; Belongs to the potassium channel family.
      
 0.672
ZBTB20
Zinc finger and BTB domain-containing protein 20.
      
 0.672
SCN3B
Sodium channel subunit beta-3.
      
 0.672
KCNQ5
Potassium voltage-gated channel subfamily KQT member 5; Belongs to the potassium channel family.
      
 0.672
ESR1
Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues.
      
 0.672
FABP7
Fatty acid-binding protein, brain; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
      
 0.672
LOC110474232
Aromatase; Belongs to the cytochrome P450 family.
      
 0.672
AHSG
Alpha-2-HS-glycoprotein.
      
 0.640
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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