STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NUPL2Nucleoporin-like protein 2. (146 aa)    
Predicted Functional Partners:
NXF1
Nuclear RNA export factor 1.
    
 0.965
GLE1
Nucleoporin GLE1.
    
 0.960
XPO1
Exportin-1.
     
 0.924
NUP214
Nuclear pore complex protein Nup214.
    
 0.846
AAAS
Aladin.
    
 0.839
NUP88
Nuclear pore complex protein Nup88.
     
 0.825
RAE1
mRNA export factor.
    
 0.806
ENSLSDP00000008068
annotation not available
   
  0.797
NUP50
Nuclear pore complex protein Nup50.
     
 0.768
NUP58
Nucleoporin p58/p45.
    
 0.760
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.