STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COMMD6COMM domain-containing protein 6. (205 aa)    
Predicted Functional Partners:
COMMD9
COMM domain-containing protein 9.
    
 0.972
COMMD1
COMM domain-containing protein 1.
   
 0.942
COMMD2
COMM domain-containing protein 2.
   
 0.925
COMMD10
COMM domain-containing protein 10.
   
 0.921
LOC110470611
COMM domain-containing protein 3.
   
 0.916
COMMD7
COMM domain-containing protein 7.
   
 0.870
COMMD4
COMM domain-containing protein 4.
    
 0.845
COMMD8
COMM domain-containing protein 8.
    
 0.828
VPS35L
VPS35 endosomal protein sorting factor-like.
    
 
 0.810
LOC110480450
COMM domain-containing protein 5.
    
 0.806
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.