STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBX1Chromobox 1. (212 aa)    
Predicted Functional Partners:
EHMT1
Histone-lysine N-methyltransferase EHMT1.
    
 0.788
E2F6
Transcription factor E2F6.
   
 0.739
SUV39H1
Histone-lysine N-methyltransferase SUV39H1.
   
 0.736
SUV39H2
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
   
0.736
RNF2
E3 ubiquitin-protein ligase RING2.
    
 0.709
L3MBTL2
Lethal(3)malignant brain tumor-like protein 2.
    
 0.659
MBTD1
MBT domain-containing protein 1.
    
 0.659
TRIM33
E3 ubiquitin-protein ligase TRIM33.
    
 0.649
SGOL1
Shugoshin-like 1.
    
 
 0.634
EMSY
Protein EMSY.
    
 
 0.622
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.