Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PHOX2APaired mesoderm homeobox protein 2A. (298 aa)    
Predicted Functional Partners:
PHOX2B
Paired mesoderm homeobox protein 2B.
   
 
 0.789
BARX2
Homeobox protein BarH-like 2.
    
 
 0.719
DBH
Dopamine beta-hydroxylase.
   
 
 0.705
LOC110482106
Kinesin-like protein KIF21A.
      
 0.587
KIF21A
Kinesin-like protein KIF21A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.587
AFF1
AF4/FMR2 family member 1.
      
 0.569
PRR16
Protein Largen.
      
 0.564
HAND2
Heart-and neural crest derivatives-expressed protein 2.
   
 
 0.551
MOXD1
DBH-like monooxygenase protein 1.
   
 
 0.455
ASCL2
Achaete-scute 2.
   
 
 0.442
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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