SNX11 protein (Lonchura striata) - STRING interaction network

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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[Homology]

Score

SNX11

LOW QUALITY PROTEIN: sorting nexin-11. (83 aa)

Predicted Functional Partners:

VPS35

0.887

VPS26B

0.779

VPS26A

0.779

WLS

0.755

VPS29

0.747

USP10

0.550

TTLL13

0.524

ZER1

0.520

SNX24

0.455

Your Current Organism:

Lonchura striata

NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SNX11	SNX24	ENSLSDP00000002609	ENSLSDP00000020379	LOW QUALITY PROTEIN: sorting nexin-11.	Sorting nexin-24.	0.455
SNX11	TTLL13	ENSLSDP00000002609	ENSLSDP00000014016	LOW QUALITY PROTEIN: sorting nexin-11.	Tubulin polyglutamylase TTLL13.	0.524
SNX11	USP10	ENSLSDP00000002609	ENSLSDP00000022757	LOW QUALITY PROTEIN: sorting nexin-11.	Ubiquitin carboxyl-terminal hydrolase.	0.550
SNX11	VPS26A	ENSLSDP00000002609	ENSLSDP00000024678	LOW QUALITY PROTEIN: sorting nexin-11.	Vacuolar protein sorting-associated protein 26A.	0.779
SNX11	VPS26B	ENSLSDP00000002609	ENSLSDP00000011399	LOW QUALITY PROTEIN: sorting nexin-11.	Vacuolar protein sorting-associated protein 26B.	0.779
SNX11	VPS29	ENSLSDP00000002609	ENSLSDP00000006390	LOW QUALITY PROTEIN: sorting nexin-11.	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	0.747
SNX11	VPS35	ENSLSDP00000002609	ENSLSDP00000025329	LOW QUALITY PROTEIN: sorting nexin-11.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.887
SNX11	WLS	ENSLSDP00000002609	ENSLSDP00000007409	LOW QUALITY PROTEIN: sorting nexin-11.	Protein wntless.	0.755
SNX11	ZER1	ENSLSDP00000002609	ENSLSDP00000004002	LOW QUALITY PROTEIN: sorting nexin-11.	Protein zer-1.	0.520
SNX24	SNX11	ENSLSDP00000020379	ENSLSDP00000002609	Sorting nexin-24.	LOW QUALITY PROTEIN: sorting nexin-11.	0.455
TTLL13	SNX11	ENSLSDP00000014016	ENSLSDP00000002609	Tubulin polyglutamylase TTLL13.	LOW QUALITY PROTEIN: sorting nexin-11.	0.524
USP10	SNX11	ENSLSDP00000022757	ENSLSDP00000002609	Ubiquitin carboxyl-terminal hydrolase.	LOW QUALITY PROTEIN: sorting nexin-11.	0.550
VPS26A	SNX11	ENSLSDP00000024678	ENSLSDP00000002609	Vacuolar protein sorting-associated protein 26A.	LOW QUALITY PROTEIN: sorting nexin-11.	0.779
VPS26A	VPS26B	ENSLSDP00000024678	ENSLSDP00000011399	Vacuolar protein sorting-associated protein 26A.	Vacuolar protein sorting-associated protein 26B.	0.968
VPS26A	VPS29	ENSLSDP00000024678	ENSLSDP00000006390	Vacuolar protein sorting-associated protein 26A.	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	0.995
VPS26A	VPS35	ENSLSDP00000024678	ENSLSDP00000025329	Vacuolar protein sorting-associated protein 26A.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.997
VPS26A	WLS	ENSLSDP00000024678	ENSLSDP00000007409	Vacuolar protein sorting-associated protein 26A.	Protein wntless.	0.699
VPS26B	SNX11	ENSLSDP00000011399	ENSLSDP00000002609	Vacuolar protein sorting-associated protein 26B.	LOW QUALITY PROTEIN: sorting nexin-11.	0.779
VPS26B	VPS26A	ENSLSDP00000011399	ENSLSDP00000024678	Vacuolar protein sorting-associated protein 26B.	Vacuolar protein sorting-associated protein 26A.	0.968
VPS26B	VPS29	ENSLSDP00000011399	ENSLSDP00000006390	Vacuolar protein sorting-associated protein 26B.	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	0.986