STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110473115Transmembrane O-methyltransferase. (251 aa)    
Predicted Functional Partners:
TK1
Thymidine kinase.
  
 
  0.685
DRD4
D(4) dopamine receptor; Belongs to the G-protein coupled receptor 1 family.
      
 0.672
TPMT
Thiopurine S-methyltransferase.
     
 0.584
ANKK1
Ankyrin repeat and protein kinase domain-containing protein 1.
      
 0.572
CYP1B1
Cytochrome P450 1B1; Belongs to the cytochrome P450 family.
   
  
 0.571
MAT2A
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
  
 
 0.566
MAT1A
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
  
 
 0.566
ASMTL
N-acetylserotonin O-methyltransferase-like protein.
     
 0.544
H6PD
GDH/6PGL endoplasmic bifunctional protein.
    
  0.490
PGD
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
     
 0.444
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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