Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
NECAB1N-terminal EF-hand calcium binding protein 1. (397 aa)    
Predicted Functional Partners:
CCDC89
Coiled-coil domain containing 89.
      
 0.567
EPB41L3
Band 4.1-like protein 1.
      
 0.564
APBA2
Amyloid beta A4 protein-binding family A member 2.
   
 
 0.521
WDR24
WD repeat-containing protein 24.
     
 0.505
KCTD2
BTB/POZ domain-containing protein KCTD2.
    
 0.486
MIEN1
Migration and invasion enhancer 1.
    
 0.476
GMCL1
Germ cell-less protein-like 1.
    
 
 0.456
EFR3A
Protein EFR3 A.
    
 
 0.427
APBA3
Amyloid beta A4 protein-binding family A member 1.
   
 
 0.405
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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