STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANTKMTProtein FAM173A. (223 aa)    
Predicted Functional Partners:
TRMT112
Multifunctional methyltransferase subunit TRM112-like protein.
   
 0.597
ENSLSDP00000008068
annotation not available
   
  0.580
EPRS1
Bifunctional glutamate/proline--tRNA ligase.
   
 
 0.559
TSR3
Probable ribosome biogenesis protein RLOC_00006116; Probable pre-rRNA processing protein involved in ribosome biogenesis.
   
  
 0.552
PRORP
Mitochondrial ribonuclease P protein 3.
   
 
 0.529
EEF2KMT
Protein-lysine N-methyltransferase EEF2KMT.
      
 0.518
TMEM104
Transmembrane protein 104.
      
 0.518
CRAMP1
Protein cramped-like.
      
 0.509
BYSL
Bystin.
   
 0.504
MRPS5
28S ribosomal protein S5, mitochondrial; Belongs to the universal ribosomal protein uS5 family.
    
 0.502
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.