STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MICALL2MICAL-like protein 2. (796 aa)    
Predicted Functional Partners:
RAB8A
Ras-related protein Rab-8A.
    
 0.924
RAB8B
Ras-related protein Rab-8B.
    
 0.924
RAB13
Ras-related protein Rab-13.
    
 0.924
ACTN1-2
Alpha-actinin-1.
    
 0.915
ACTN1
Alpha-actinin-1.
    
0.915
RAB12
Ras-related protein Rab-12.
    
 0.616
ALS2CL
ALS2 C-terminal-like protein.
    
 
 0.547
ITSN2
Intersectin-2.
   
 
 0.542
CAPZB
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
 0.522
LOC110483333
Peripheral plasma membrane protein CASK-like.
   
  0.516
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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