Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MICALL2MICAL-like protein 2. (796 aa)    
Predicted Functional Partners:
RAB8A
Ras-related protein Rab-8A.
    
 0.942
RAB8B
Ras-related protein Rab-8B.
    
 0.942
RAB13
Ras-related protein Rab-13.
    
 0.942
ACTN1
Alpha-actinin-1.
    
 
0.931
ALS2CL
ALS2 C-terminal-like protein.
     
 0.695
RAB12
Ras-related protein Rab-12.
    
 0.572
BTF3
Transcription factor BTF3; Belongs to the NAC-beta family.
    
 
 0.570
MOGAT2
2-acylglycerol O-acyltransferase 2-A.
   
  
 0.569
RNF220
E3 ubiquitin-protein ligase RNF220.
      
 0.544
SEMA4B
Semaphorin-4B; Belongs to the semaphorin family.
      
 0.534
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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