Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
MBNL2Muscleblind-like protein 2. (391 aa)    
Predicted Functional Partners:
CELF1
CUGBP Elav-like family member 1.
   
 
 0.663
CELF2
CUGBP Elav-like family member 2.
   
 
 0.637
ACOX1
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
    
   0.601
MBNL1
Muscleblind-like protein 1.
   
   0.559
CNBP
Cellular nucleic acid-binding protein.
   
  
 0.543
RBM20
RNA-binding protein 20.
      
 0.504
ZNF609
Zinc finger protein 609.
      
 0.473
RBFOX2
RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.
    
 
 0.430
CLASP1
CLIP-associating protein 1.
      
 0.428
CDYL
Chromodomain Y-like protein.
      
 0.408
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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