Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MSS51MYND-type domain-containing protein. (427 aa)    
Predicted Functional Partners:
ANKRD37
Ankyrin repeat domain-containing protein 37.
    
 0.689
LOC110478540
Cytochrome c oxidase assembly protein COX14 homolog.
      
 0.674
TRMU
Mitochondrial tRNA-specific 2-thiouridylase 1.
    
 
 0.591
QRSL1
Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the amidase family. GatA subfamily.
      
 0.585
LOC110480956
N-acetylmuramoyl-L-alanine amidase.
      
 0.584
RIPOR2
Protein FAM65B.
    
 
 0.571
IGFN1
Immunoglobulin like and fibronectin type III domain containing 1.
   
 
 0.570
ALPK3
Alpha-protein kinase 3.
      
 0.564
ALPK2
Alpha-protein kinase 2.
      
 0.564
OXSM
3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
      
 0.563
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.