Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CD59CD59 glycoprotein. (131 aa)    
Predicted Functional Partners:
LOC110473473
Complement receptor type 1.
     
 0.868
C9
Complement component C9.
    
 0.862
PIGA
Phosphatidylinositol N-acetylglucosaminyltransferase subunit A.
      
 0.802
C5
Complement C5.
    
 0.781
C8B
Complement component C8 beta chain.
    
 0.736
C7
Complement component C7.
    
 0.735
ENSLSDP00000010892
annotation not available
     
 0.703
ENSLSDP00000010894
annotation not available
     
 0.703
C8A
Complement component C8 alpha chain.
    
 0.677
VTN
Vitronectin.
      
 0.668
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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