STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLSDP00000002868annotation not available (284 aa)    
Predicted Functional Partners:
URI1
Unconventional prefoldin RPB5 interactor.
    
 
 0.863
WDR92
WD repeat-containing protein 92.
   
 
 0.858
PFDN2
Prefoldin subunit 2.
    
 
 0.850
PDRG1
P53 and DNA damage-regulated protein 1.
   
 
 0.845
POLR2E
DNA-directed RNA polymerases I, II, and III subunit RPABC1.
   
 
 0.824
RPAP3
RNA polymerase II-associated protein 3.
    
 
 0.821
PIH1D1
PIH1 domain-containing protein 1.
    
 
 0.771
RUVBL2
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
   
 
 0.750
RPAP2
Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2.
    
 
 0.688
PFDN5
Prefoldin subunit 5.
   
  
 0.670
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.