STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110475502Cytochrome c oxidase assembly protein COX19. (93 aa)    
Predicted Functional Partners:
COASY
Bifunctional coenzyme A synthase.
  
 0.949
PPCS
Phosphopantothenate--cysteine ligase.
    
 0.877
PANK4
Pantothenate kinase 4; Belongs to the type II pantothenate kinase family.
     
 0.774
HLCS
Biotin--protein ligase.
  
 
 0.747
LOC110480699
Cytochrome c oxidase copper chaperone.
     
 0.660
LOC110474649
Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
     
 0.605
ENSLSDP00000015299
annotation not available
     
 0.605
COX11
Cytochrome c oxidase assembly protein COX11, mitochondrial.
   
 
 0.594
LOC110468874
Cytochrome c oxidase assembly factor 6.
   
 
 0.566
DCAKD
Dephospho-CoA kinase domain-containing protein.
   
 0.565
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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