Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARHGEF10LRho guanine nucleotide exchange factor 10 like. (562 aa)    
Predicted Functional Partners:
AFMID
Arylformamidase.
   
  
 0.839
KHK
Ketohexokinase.
      
 0.805
RPS24
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
    
 
 0.734
USO1
General vesicular transport factor p115.
      
 0.599
RESF1
Uncharacterized protein KIAA1551.
      
 0.584
MORN5
MORN repeat-containing protein 5.
      
 0.569
GPR155
Integral membrane protein GPR155.
      
 0.567
NFYC
Nuclear transcription factor Y subunit gamma.
      
 0.567
MYO1B
Unconventional myosin-Ib; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
      
 0.565
TMEM201_0
Transmembrane protein 201.
      
 0.565
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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