STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADAP1Arf-GAP with dual PH domain-containing protein 1. (485 aa)    
Predicted Functional Partners:
KIF13B
Kinesin-like protein KIF13B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.518
ENSLSDP00000006645
annotation not available
    
 
 0.518
KIF13A
Kinesin-like protein KIF13A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.518
ASAP3
ArfGAP with SH3 domain, ankyrin repeat and PH domain 3.
    
 
0.496
RPS6KC1
Ribosomal protein S6 kinase delta-1.
      
 0.495
PSMG3
Proteasome assembly chaperone 3.
      
 0.478
APPL1
DCC-interacting protein 13-alpha.
    
 
 0.409
APPL2
DCC-interacting protein 13-beta.
    
 
 0.409
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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