Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
ADAP1Arf-GAP with dual PH domain-containing protein 1. (485 aa)    
Predicted Functional Partners:
RPS6KC1
Ribosomal protein S6 kinase delta-1.
      
 0.708
PSMG3
Proteasome assembly chaperone 3.
      
 0.540
ASAP3
ArfGAP with SH3 domain, ankyrin repeat and PH domain 3.
    
 
 0.481
RPS6KL1
Ribosomal protein S6 kinase-like 1.
      
 0.435
UTP6
U3 small nucleolar RNA-associated protein 6.
      
 0.435
GPR146
Putative G-protein coupled receptor 146.
      
 0.433
SH3YL1
SH3 domain-containing YSC84-like protein 1.
    
 
 0.421
NCL
Nucleolin.
    
 
 0.412
ARFGAP2
ADP-ribosylation factor GTPase-activating protein 2.
    
 
 0.412
EVI2A
Protein EVI2A.
      
 0.408
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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