STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GET4Golgi to ER traffic protein 4. (328 aa)    
Predicted Functional Partners:
GET3
ATPase asna1.
    
 0.990
RAD23B
UV excision repair protein RAD23 B.
    
 0.922
SGTA
Small glutamine-rich tetratricopeptide repeat-containing protein alpha.
   
 0.905
SGTB
Small glutamine-rich tetratricopeptide repeat-containing protein beta.
   
 0.862
TTC33
Tetratricopeptide repeat protein 33.
   
 0.771
RNF126
E3 ubiquitin-protein ligase RNF126.
   
 
 0.720
GET1
Tail-anchored protein insertion receptor WRB.
    
 0.715
PAQR9
Progestin and adipoQ receptor family member 9.
      
 0.616
SEC61B
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
   
 0.604
SLC24A2
Sodium/potassium/calcium exchanger 2; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
    
   0.587
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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