STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC26Tetratricopeptide repeat domain 26. (541 aa)    
Predicted Functional Partners:
IFT52
Intraflagellar transport protein 52.
   
 0.991
IFT46
Intraflagellar transport protein 46.
  
 0.991
IFT57
Intraflagellar transport protein 57.
    
 0.989
IFT88
Intraflagellar transport protein 88.
  
 0.988
LOC110482908
Phosphodiesterase.
  
 
 0.986
IFT80
Intraflagellar transport protein 80.
  
 0.983
CLUAP1
Clusterin-associated protein 1.
  
 
 0.983
IFT81
Intraflagellar transport protein 81.
   
 0.981
TRAF3IP1
TRAF3-interacting protein 1.
    
 0.972
IFT172
Intraflagellar transport protein 172.
    
 0.972
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.