STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C8orf37Protein C8orf37. (282 aa)    
Predicted Functional Partners:
AFF4
AF4/FMR2 family member 4.
      
 0.622
PTGER3
Prostaglandin E2 receptor EP3 subtype.
      
 0.586
ATXN2
Ataxin-2.
      
 0.575
ARL2BP
ADP-ribosylation factor-like protein 2-binding protein.
      
 0.570
TTC8
Tetratricopeptide repeat protein 8.
      
 0.560
OFD1
Oral-facial-digital syndrome 1 protein.
      
 0.551
RP1L1
Retinitis pigmentosa 1-like 1 protein.
      
 0.546
IFT172
Intraflagellar transport protein 172.
      
 0.535
LOC110481425
Visinin.
      
 0.508
NXNL1
Nucleoredoxin-like protein 1.
      
 0.472
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.