STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TDRD6Tudor domain-containing protein 6. (2069 aa)    
Predicted Functional Partners:
PIWIL2
Piwi like RNA-mediated gene silencing 2.
   
 0.858
LOC110478429
Piwi-like protein 1; Belongs to the argonaute family.
   
 0.855
TDRD9
Putative ATP-dependent RNA helicase TDRD9.
   
0.616
ENSLSDP00000005662
annotation not available
   
 0.596
TDRKH
Tudor and KH domain-containing protein.
   
 0.539
ENSLSDP00000025365
annotation not available
    
 0.509
PRMT5
Protein arginine N-methyltransferase 5.
      
 0.507
E2F1
Transcription factor E2F1.
    
   0.489
MOV10
Putative helicase MOV-10.
   
 0.472
MOV10L1
Putative helicase Mov10l1.
   
 0.472
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.