STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGLN3Egl nine 3. (241 aa)    
Predicted Functional Partners:
EPAS1
Endothelial PAS domain-containing protein 1.
    
 0.856
HIF3A
Hypoxia-inducible factor 3-alpha.
    
 0.830
HIF1A
Hypoxia-inducible factor 1-alpha.
    
 0.830
VHL
Von Hippel-Lindau disease tumor suppressor.
    
 0.802
NPAS3
Neuronal PAS domain-containing protein 3.
    
 0.777
ELOC
Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.
     
 0.738
CUL2
Cullin-2; Belongs to the cullin family.
     
 0.674
ELOB
Transcription elongation factor B polypeptide 2.
     
 0.651
RBX1
E3 ubiquitin-protein ligase RBX1.
     
 0.601
PSMC3
26S protease regulatory subunit 6A; Belongs to the AAA ATPase family.
     
 0.481
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.