STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPTSSASerine palmitoyltransferase small subunit A. (68 aa)    
Predicted Functional Partners:
SPTLC1
Serine palmitoyltransferase 1.
    
 0.934
SPTLC2
Serine palmitoyltransferase 2.
    
 0.728
SPTLC3
Serine palmitoyltransferase 3.
    
 0.728
ISM1
Isthmin-1.
    
 0.728
ORMDL3
ORM1-like protein; Negative regulator of sphingolipid synthesis.
    
 
 0.686
ORMDL1
ORM1-like protein; Negative regulator of sphingolipid synthesis.
    
 
 0.686
ISM2
Isthmin-2.
    
 0.626
B4GALT5
Beta-1,4-galactosyltransferase 5.
      
 0.550
UGP2
UTP--glucose-1-phosphate uridylyltransferase.
      
 0.524
UGCG
Ceramide glucosyltransferase.
      
 0.509
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.