Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RIPOR3Protein FAM65C. (887 aa)    
Predicted Functional Partners:
TAGAP
T-cell activation Rho GTPase-activating protein.
   
  
 0.797
LOC110468500
Estradiol 17-beta-dehydrogenase 11; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  
 0.715
PTPRE
Receptor-type tyrosine-protein phosphatase epsilon.
     
 0.680
LOC110475361
Myotubularin-related protein 9.
      
 0.630
MTMR9
Myotubularin-related protein 9.
      
 0.630
GRXCR1
Glutaredoxin domain-containing cysteine-rich protein 1.
   
 
 0.587
ENSLSDP00000008068
annotation not available
   
  0.583
RBM20
RNA-binding protein 20.
     
 0.578
NDUFS6
NADH:ubiquinone oxidoreductase subunit S6.
    
   0.574
LOC110482719
Leukotriene C4 synthase.
      
 0.568
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.