STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PARD6BPartitioning defective 6 beta. (372 aa)    
Predicted Functional Partners:
CDC42
Cell division control protein 42.
    
 0.982
PRKCI
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.980
PRKCZ
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.980
MPP5
MAGUK p55 subfamily member 5; Belongs to the MAGUK family.
    
0.940
PARD6A
Partitioning defective 6 alpha.
  
 
 
0.932
PARD6G
Partitioning defective 6 gamma.
  
  
 
0.901
PARD3
Partitioning defective 3.
    
 0.808
PARD3B_1
Partitioning defective 3 B.
    
 0.772
PARD3B
Partitioning defective 3 B.
    
 0.772
LLGL2
Lethal(2) giant larvae 2.
    
 
 0.769
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.