STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNFRSF13CUncharacterized protein. (207 aa)    
Predicted Functional Partners:
TNFSF13B
Tumor necrosis factor ligand superfamily member 13B; Belongs to the tumor necrosis factor family.
    
 0.983
TRAF3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.969
TRAF5
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.823
ENSLSDP00000004644
annotation not available
   
 
 0.805
CD40LG
CD40 ligand; Belongs to the tumor necrosis factor family.
     
 0.800
TRAF1
TNF receptor associated factor 1.
   
 0.721
TRAF2
TNF receptor-associated factor.
   
 0.721
MAP3K14
Mitogen-activated protein kinase kinase kinase 14.
   
 
 0.713
TNFRSF13B
Tumor necrosis factor receptor superfamily member 13B.
   
  
 0.679
BIRC2
Inhibitor of apoptosis protein.
     
 0.636
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.