STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110477190CheR domain-containing protein. (273 aa)    
Predicted Functional Partners:
TOMM22
Mitochondrial import receptor subunit TOM22.
   
 0.960
TOMM40L
Mitochondrial import receptor subunit TOM40B.
   
 0.933
TOMM7
Mitochondrial import receptor subunit TOM7.
   
 0.915
TOMM70
Mitochondrial import receptor subunit TOM70.
   
 0.913
TOMM5
Mitochondrial import receptor subunit TOM5 homolog.
   
 
 0.743
TOMM6
Mitochondrial import receptor subunit TOM6 homolog.
     
 0.733
PINK1
Serine/threonine-protein kinase PINK1, mitochondrial.
    
 0.730
VDAC2
Voltage-dependent anion-selective channel protein 2.
   
 0.674
VDAC3
Voltage-dependent anion-selective channel protein 3.
   
 0.674
VDAC1
Voltage-dependent anion-selective channel protein 1.
   
 0.674
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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