STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNFRSF21Tumor necrosis factor receptor superfamily member 21. (658 aa)    
Predicted Functional Partners:
APP
Amyloid beta A4 protein.
    
 
 0.921
APLP2
Amyloid-like protein 2.
    
 
 0.685
TRADD
Tumor necrosis factor receptor type 1-associated DEATH domain protein.
    
 
 0.663
PODXL2
Podocalyxin-like protein 2.
    
 
 0.534
CASP6
Caspase-6; Belongs to the peptidase C14A family.
      
 0.528
FASLG
Tumor necrosis factor ligand superfamily member 6; Belongs to the tumor necrosis factor family.
      
 0.426
HHIP
Hedgehog-interacting protein.
    
 
 0.421
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.