STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POMT1Protein O-mannosyl-transferase 1. (725 aa)    
Predicted Functional Partners:
POMT2
Protein O-mannosyl-transferase 2.
  
 
0.995
POMGNT2
Protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2.
     
 0.964
POMGNT1
Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1.
     
 0.964
ENSLSDP00000009175
annotation not available
    
 0.800
DAG1
Dystroglycan.
    
 0.800
FKTN
Fukutin.
   
  
 0.665
B3GALNT2
Hexosyltransferase.
      
 0.659
POMK
Protein O-mannose kinase.
    
 
 0.658
GMPPB
Mannose-1-phosphate guanyltransferase beta-A.
   
 
 0.631
RXYLT1
Transmembrane protein 5.
   
  
 0.625
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.