Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
FAM177A1Protein FAM177A1. (207 aa)    
Predicted Functional Partners:
LOC110470411
FXYD domain-containing ion transport regulator; Belongs to the FXYD family.
      
 0.599
MED29
Mediator of RNA polymerase II transcription subunit 29.
      
 0.573
DEPDC7
DEP domain-containing protein 7.
      
 0.569
FAM135A
Protein FAM135A.
      
 0.567
GJD2
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
      
 0.566
GJD2_0
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
      
 0.566
EED
Polycomb protein EED.
      
 0.566
FAM135B
Protein FAM135B.
      
 0.565
TOMM5
Mitochondrial import receptor subunit TOM5 homolog.
      
 0.527
BCCIP
Protein BCCIP homolog; Belongs to the BCP1 family.
      
 0.527
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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